This page presents the software tools developed in our Pattern Discovery and Management project. The software posted here is only for demo purposes. To get the software, please contact Dr. Jason T. L. Wang by sending an email to jason@cis.njit.edu.



Tool Description
SDISCOVER finding active motifs in a set of protein or DNA sequences.
SCLASSIFY
 classifying DNA sequences to determine whether or not they belong to the Alu family.
TDISCOVER
 finding active motifs in a set of trees (represented in a preorder parenthesized form); in our case, we represent RNA secondary structures as trees.
DOCUCOMP
 comparing two SGML documents.
TMATCH
 comparing two trees (represented in a preorder parenthesized form).